VIRsiRNAdb

../../tmp/servers/virsirnadb/499213425
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi1179	1	`cattgtggacgtgcagtac`	19
D10749.1	HPCHCJ1 Hepatitis C virus genomic RNA, complete genome, isolate: HC-J1	2426	`...................`	2444	100
M67463.1	HPCCGAA Hepatitis C virus subtype 1a, complete genome	2426	`...................`	2444	100
M62321.1	HPCPLYPRE Hepatitis C virus subtype 1a, complete genome	2426	`...................`	2444	100
AF011751.1	Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds	2426	`...................`	2444	100
AF011752.1	Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds	2426	`...................`	2444	100
AF011753.1	Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds	2426	`...................`	2444	100
AF271632.1	Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome	2426	`...................`	2444	100
AF290978.1	Hepatitis C virus subtype 1a isolate colonel, complete genome	2414	`...................`	2432	100
AF511949.1	Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque	2426	`...................`	2444	100
AY587845.1	Hepatitis C virus strain RF1_2k/1b, N687 polyprotein gene, complete c	2365	`...................`	2383	100
EF032883.1	Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge	2348	`...................`	2366	100
EF032885.1	Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen	2347	`...................`	2365	100
EF032886.1	Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete	2353	`...................`	2371	100
EF032887.1	Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen	2360	`...................`	2378	100
EF032888.1	Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g	2348	`...................`	2366	100
EF032889.1	Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge	2332	`...................`	2350	100
EF032890.1	Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g	2346	`...................`	2364	100
EF032900.1	Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen	2346	`...................`	2364	100
EF407421.1	Hepatitis C virus isolate 8030 polyprotein gene, complete cds	2329	`...................`	2347	100
EF407423.1	Hepatitis C virus isolate 8028 polyprotein gene, complete cds	2372	`...................`	2390	100
EF407425.1	Hepatitis C virus isolate 6071 polyprotein gene, complete cds	2340	`...................`	2358	100
EF407433.1	Hepatitis C virus isolate 7046 polyprotein gene, complete cds	2377	`...................`	2395	100
EF407438.1	Hepatitis C virus isolate 7012 polyprotein gene, complete cds	2373	`...................`	2391	100
EF407441.1	Hepatitis C virus isolate 1036 polyprotein gene, complete cds	2385	`...................`	2403	100
EF407442.1	Hepatitis C virus isolate 8012 polyprotein gene, complete cds	2340	`...................`	2358	100
EF407445.1	Hepatitis C virus isolate 5009 polyprotein gene, complete cds	2347	`...................`	2365	100
EF407446.1	Hepatitis C virus isolate 8009 polyprotein gene, complete cds	2347	`...................`	2365	100
EF407450.1	Hepatitis C virus isolate 6020 polyprotein gene, complete cds	2344	`...................`	2362	100
EF407451.1	Hepatitis C virus isolate 7041 polyprotein gene, complete cds	2349	`...................`	2367	100
EF407452.1	Hepatitis C virus isolate 2005 polyprotein gene, complete cds	2357	`...................`	2375	100
EF407453.1	Hepatitis C virus isolate 4035 polyprotein gene, complete cds	2373	`...................`	2391	100
EF407455.1	Hepatitis C virus isolate 7065 polyprotein gene, complete cds	2386	`...................`	2404	100
EF407457.1	Hepatitis C virus isolate 1003 polyprotein gene, complete cds	2230	`...................`	2248	100
EU155241.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete	2322	`...................`	2340	100
EU362876.1	Hepatitis C virus isolate 1013_FU24 polyprotein (pol) gene, complete	2385	`...................`	2403	100
EU362879.1	Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c	2385	`...................`	2403	100
EU362884.1	Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete	2388	`...................`	2406	100
EU362885.1	Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c	2344	`...................`	2362	100
EU362887.1	Hepatitis C virus isolate 6020_FU24 polyprotein (pol) gene, complete	2344	`...................`	2362	100
EU362892.1	Hepatitis C virus isolate 7012_FU24 polyprotein (pol) gene, complete	2371	`...................`	2389	100
EU362894.1	Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c	2323	`...................`	2341	100
EU362896.1	Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete	2385	`...................`	2403	100
EU362897.1	Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete	2385	`...................`	2403	100
EU363761.1	Recombinant Hepatitis C virus H77C/JFH1, complete genome	2425	`...................`	2443	100
EU239715.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet	2352	`...................`	2370	100
EU155216.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet	2346	`...................`	2364	100
EU155236.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet	2317	`...................`	2335	100
EU155239.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete	2344	`...................`	2362	100
EU155244.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete	2367	`...................`	2385	100
EU155245.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete	2344	`...................`	2362	100
EU155246.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete	2345	`...................`	2363	100
EU482836.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet	2357	`...................`	2375	100
EU482838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet	2361	`...................`	2379	100
EU482841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V387/2004, complet	2359	`...................`	2377	100
EU482845.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V438/2006, complet	2359	`...................`	2377	100
EU482848.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete	2328	`...................`	2346	100
EU482852.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet	2343	`...................`	2361	100
EU482862.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet	2352	`...................`	2370	100
EU482864.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet	2359	`...................`	2377	100
EU482865.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete	2332	`...................`	2350	100
EU482878.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V19/2004, complete	2352	`...................`	2370	100
EU482882.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V410/2006, complet	2348	`...................`	2366	100
EU482887.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V66/2002, complete	2322	`...................`	2340	100
EU155249.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V337/2006, complet	2343	`...................`	2361	100
EU155252.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V362/2006, complet	2343	`...................`	2361	100
EU155266.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V390/2006, complet	2295	`...................`	2313	100
EU155267.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V391/2006, complet	2332	`...................`	2350	100
EU155270.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V399/2006, complet	2343	`...................`	2361	100
EU155271.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V401/2006, complet	2348	`...................`	2366	100
EU155275.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V409/2006, complet	2346	`...................`	2364	100
EU155278.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V437/2006, complet	2336	`...................`	2354	100
EU155286.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V319/2001, complet	2321	`...................`	2339	100
EU155290.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V325/2001, complet	2331	`...................`	2349	100
EU155291.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V326/2002, complet	2345	`...................`	2363	100
EU155293.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V328/2001, complet	2296	`...................`	2314	100
EU155296.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V332/2002, complet	2342	`...................`	2360	100
EU155297.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V333/2002, complet	2342	`...................`	2360	100
EU155299.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V335/2003, complet	2345	`...................`	2363	100
EU155309.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V356/2003, complet	2341	`...................`	2359	100
EU155310.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V357/2004, complet	2341	`...................`	2359	100
EU155311.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V411/2003, complet	2352	`...................`	2370	100
EU155312.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V412/2000, complet	2334	`...................`	2352	100
EU155313.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V413/2003, complet	2334	`...................`	2352	100
EU155338.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V169/1996, complet	2344	`...................`	2362	100
EU155340.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V185/1991, complet	2321	`...................`	2339	100
EU155342.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V197/1989, complet	2321	`...................`	2339	100
EU155343.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V214/1996, complet	2345	`...................`	2363	100
EU155344.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V216/1990, complet	2332	`...................`	2350	100
EU155378.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V26/2003, complete	2283	`...................`	2301	100
EU234065.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V212/1990, complet	2321	`...................`	2339	100
EU569722.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V215/1989, complet	2360	`...................`	2378	100
EU569723.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V13/2005, complete	2345	`...................`	2363	100
EU595698.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V44/2001, complete	2343	`...................`	2361	100
EU255936.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V510/2006, complet	2353	`...................`	2371	100
EU255940.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V433/2006, complet	2359	`...................`	2377	100
EU255941.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V697/2006, complet	2358	`...................`	2376	100
EU255942.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V699/2007, complet	2358	`...................`	2376	100
EU256087.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V114/2001, complet	2321	`...................`	2339	100
EU256094.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V74/2004, complete	2353	`...................`	2371	100
EU256095.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V81/2002, complete	2356	`...................`	2374	100
EU256096.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V321/2001, complet	2346	`...................`	2364	100
EU256105.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V505/2001, complet	2376	`...................`	2394	100
EU256106.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V32/2004, complete	2344	`...................`	2362	100
EU255994.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V103/2005, complet	2336	`...................`	2354	100
EU256003.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V444/2006, complet	2359	`...................`	2377	100
EU256005.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V451/2006, complet	2354	`...................`	2372	100
EU256008.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V47/2002, complete	2321	`...................`	2339	100
EU256009.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V49/2004, complete	2339	`...................`	2357	100
EU256012.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V511/2006, complet	2360	`...................`	2378	100
EU256013.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V53/2004, complete	2350	`...................`	2368	100
EU256024.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V72/2006, complete	2321	`...................`	2339	100
EU256028.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V84/2001, complete	2352	`...................`	2370	100
EU256031.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V89/2006, complete	2350	`...................`	2368	100
EU256036.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V97/2004, complete	2352	`...................`	2370	100
EU256037.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V98/2004, complete	2359	`...................`	2377	100
EU256038.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V99/2004, complete	2357	`...................`	2375	100
EU256039.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V16/2004, complete	2345	`...................`	2363	100
EU256040.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V18/2004, complete	2352	`...................`	2370	100
EU256041.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2/2005, complete	2357	`...................`	2375	100
EU256044.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V378/2001, complet	2331	`...................`	2349	100
EU256050.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V397/2006, complet	2353	`...................`	2371	100
EU256052.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V403/2006, complet	2351	`...................`	2369	100
EU256058.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V8/2005, complete	2338	`...................`	2356	100
EU256070.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V232/2003, complet	2345	`...................`	2363	100
EU256074.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V264/2005, complet	2350	`...................`	2368	100
EU255963.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V166/1992, complet	2353	`...................`	2371	100
EU255965.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V168/1990, complet	2350	`...................`	2368	100
EU255967.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V171/1997, complet	2331	`...................`	2349	100
EU255968.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V173/1989, complet	2336	`...................`	2354	100
EU255977.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V187/1991, complet	2351	`...................`	2369	100
EU255978.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V188/1991, complet	2340	`...................`	2358	100
EU255979.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V189/1991, complet	2353	`...................`	2371	100
EU255980.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V190/1990, complet	2344	`...................`	2362	100
EU255981.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V191/1990, complet	2359	`...................`	2377	100
EU255983.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V195/1990, complet	2345	`...................`	2363	100
EU255984.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V200/1990, complet	2338	`...................`	2356	100
EU255986.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V203/1989, complet	2353	`...................`	2371	100
EU255990.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V209/1992, complet	2351	`...................`	2369	100
FJ024275.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1708/2007, comple	2318	`...................`	2336	100
FJ024278.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1713/2007, comple	2320	`...................`	2338	100
FJ024280.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1717/2007, comple	2335	`...................`	2353	100
EU862824.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V31/2004, partial	2343	`...................`	2361	100
EU862827.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V218/1993, partial	2343	`...................`	2361	100
FJ205867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1709/2007, comple	2386	`...................`	2404	100
FJ205868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1714/2007, comple	2330	`...................`	2348	100
FJ390395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1747/2008, comple	2313	`...................`	2331	100
EU781823.1	Hepatitis C virus subtype 1a isolate 03-12, complete genome	2349	`...................`	2367	100
EU643835.1	Hepatitis C virus isolate HCV-6-D177 polyprotein gene, complete cds	2162	`...................`	2180	100
FJ821465.1	Hepatitis C virus strain M21-2k/1b, complete genome	2412	`...................`	2430	100
EU862832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V27/2003, complete	2340	`...................`	2358	100
AF009606.1	Hepatitis C virus subtype 1a polyprotein gene, complete cds	2426	`...................`	2444	100
EF407411.1	Hepatitis C virus isolate 5043 polyprotein gene, complete cds	2336	`_..................`	2353	94
EF407440.1	Hepatitis C virus isolate 7002 polyprotein gene, complete cds	2374	`.................._`	2391	94
EU362890.1	Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c	2385	`.................._`	2402	94
EU362907.1	Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds	2374	`.................._`	2391	94
EU155227.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V157/2003, complet	2374	`.................._`	2391	94
EU482837.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete	2343	`.................._`	2360	94
EU482856.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet	2344	`.................._`	2361	94
EU155248.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V336/2006, complet	2344	`.................._`	2361	94
EU155274.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V407/2006, complet	2297	`.................._`	2314	94
EU155288.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V322/2002, complet	2343	`.................._`	2360	94
EU155321.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V426/2001, complet	2300	`.................._`	2317	94
EU256097.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V324/2001, complet	2352	`.................._`	2369	94
EU256033.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V94/2005, complete	2354	`_..................`	2371	94
EU862828.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V12/2004, complete	2359	`.................._`	2376	94
D10988.1	HPCJ8G Hepatitis C virus genome	2438	`...c...............`	2456	94
D11168.1	HPCJTA Hepatitis C virus (HCV) complete genome	2426	`...c...............`	2444	94
D11355.1	HPCJTB Hepatitis C virus genomic RNA, complete genome, strain: JT'	2426	`...c...............`	2444	94
D14853.1	HPCCGS Hepatitis C virus (isolate HC-G9) genomic RNA, complete genome	2426	`...c...............`	2444	94
Y12083.1	Hepatitis C virus genotype 6a RNA for HCV polyprotein	2380	`...a...............`	2398	94
U89019.1	HCU89019 Hepatitis C virus subtype 1b, complete genome	2420	`...c...............`	2438	94
AF176573.1	Hepatitis C virus subtype 1b strain 274933RU, complete genome	2426	`...c...............`	2444	94
AF165061.1	Hepatitis C virus subtype 1b strain MD9-1, complete genome	2414	`...c...............`	2432	94
AF165062.1	Hepatitis C virus subtype 1b strain MD9-2, complete genome	2414	`...c...............`	2432	94
AB031663.1	Hepatitis C virus (isolate VAT96) genomic RNA, complete genome	2438	`...c...............`	2456	94
AF238486.1	Hepatitis C virus subtype 2b strain MD2b-1, complete genome	2401	`...c...............`	2419	94
AF208024.1	Hepatitis C virus subtype 1b strain MD34, complete genome	2408	`...............a...`	2426	94
AF207754.1	Hepatitis C virus subtype 1b strain MD13, complete genome	2414	`...c...............`	2432	94
AB030907.1	Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome	2438	`...c...............`	2456	94
AB049088.1	Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094	2426	`...............a...`	2444	94
AB049090.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	2395	`...............a...`	2413	94
AY051292.1	Hepatitis C virus (isolate India) polyprotein mRNA, complete cds	2426	`...c...............`	2444	94
AF483269.1	Hepatitis C virus type 1b isolate HCV-TR1 from Turkey, complete genom	2391	`...c...............`	2409	94
AF511950.1	Hepatitis C virus isolate XF224 polyprotein-like gene, complete seque	2398	`......a............`	2416	94
AY232730.1	Hepatitis C virus clone MD2b1-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232731.1	Hepatitis C virus clone MD2b1-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232732.1	Hepatitis C virus clone MD2b2-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232733.1	Hepatitis C virus clone MD2b2-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232734.1	Hepatitis C virus clone MD2b3-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232735.1	Hepatitis C virus clone MD2b3-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232736.1	Hepatitis C virus clone MD2b4-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232737.1	Hepatitis C virus clone MD2b4-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232738.1	Hepatitis C virus clone MD2b5-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232739.1	Hepatitis C virus clone MD2b5-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232741.1	Hepatitis C virus clone MD2b6-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232742.1	Hepatitis C virus clone MD2b7-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232743.1	Hepatitis C virus clone MD2b7-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232744.1	Hepatitis C virus clone MD2b8-1 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY232745.1	Hepatitis C virus clone MD2b8-2 polyprotein mRNA, complete cds	2401	`...c...............`	2419	94
AY651061.1	Hepatitis C virus isolate Khaja1, complete genome	2426	`...c...............`	2444	94
AB154201.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...............`	2432	94
AB154202.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...............`	2432	94
AY859526.1	Hepatitis C virus (isolate 6a33), complete genome	2395	`...a...............`	2413	94
DQ480512.1	Hepatitis C virus subtype 6a strain 6a77, complete genome	2398	`...a...............`	2416	94
DQ480513.1	Hepatitis C virus subtype 6a strain 6a35, complete genome	2398	`...a...............`	2416	94
DQ480514.1	Hepatitis C virus subtype 6a strain 6a63, complete genome	2398	`...a...............`	2416	94
DQ480515.1	Hepatitis C virus subtype 6a strain 6a64, complete genome	2398	`...a...............`	2416	94
DQ480516.1	Hepatitis C virus subtype 6a strain 6a61, complete genome	2398	`...a...............`	2416	94
DQ480518.1	Hepatitis C virus subtype 6a strain 6a65, complete genome	2398	`...a...............`	2416	94
DQ480519.1	Hepatitis C virus subtype 6a strain 6a66, complete genome	2398	`...a...............`	2416	94
DQ480520.1	Hepatitis C virus subtype 6a strain 6a67, complete genome	2398	`...a...............`	2416	94
DQ480521.1	Hepatitis C virus subtype 6a strain 6a69, complete genome	2398	`...a...............`	2416	94
DQ480522.1	Hepatitis C virus subtype 6a strain 6a72, complete genome	2398	`...a...............`	2416	94
DQ480523.1	Hepatitis C virus subtype 6a strain 6a62, complete genome	2398	`...a...............`	2416	94
DQ835761.1	Hepatitis C virus subtype 6j isolate C-0667, complete genome	2429	`...............a...`	2447	94
EF032884.1	Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen	2327	`............a......`	2345	94
EF032892.1	Hepatitis C virus subtype 1b isolate BR1427_P1_10.7.03 polyprotein ge	2402	`...............a...`	2420	94
EF032893.1	Hepatitis C virus subtype 1b isolate BR1427_P3_11.10.03 polyprotein g	2400	`...............a...`	2418	94
EF638081.1	Hepatitis C virus subtype 1b from Hubei, complete genome	2382	`...............a...`	2400	94
EF407414.1	Hepatitis C virus isolate 7018 polyprotein gene, complete cds	2329	`.........t.........`	2347	94
EF407418.1	Hepatitis C virus isolate 7020 polyprotein gene, complete cds	2370	`...c...............`	2388	94
EF407422.1	Hepatitis C virus isolate 6001 polyprotein gene, complete cds	2332	`...c...............`	2350	94
EF407428.1	Hepatitis C virus isolate 1024 polyprotein gene, complete cds	2332	`...............a...`	2350	94
EF407432.1	Hepatitis C virus isolate 1013 polyprotein gene, complete cds	2387	`...............a...`	2405	94
EF407437.1	Hepatitis C virus isolate 1030 polyprotein gene, complete cds	2386	`...............a...`	2404	94
EF407443.1	Hepatitis C virus isolate 7024 polyprotein gene, complete cds	2386	`...............a...`	2404	94
EF407448.1	Hepatitis C virus isolate 6018 polyprotein gene, partial cds	2386	`...c...............`	2404	94
EF407449.1	Hepatitis C virus isolate 2027 polyprotein gene, complete cds	2386	`...c...............`	2404	94
EF407454.1	Hepatitis C virus isolate 6031 polyprotein gene, complete cds	2338	`...c...............`	2356	94
EF407456.1	Hepatitis C virus isolate 4025 polyprotein gene, complete cds	2385	`.........t.........`	2403	94
EF407487.1	Hepatitis C virus isolate 6057 polyprotein gene, complete cds	2373	`...c...............`	2391	94
EF407503.1	Hepatitis C virus isolate 5083 polyprotein gene, complete cds	2373	`...............a...`	2391	94
EU246930.1	Hepatitis C virus strain D9 polyprotein gene, complete cds	2416	`...a...............`	2434	94
EU362877.1	Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete	2331	`...............a...`	2349	94
EU362878.1	Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c	2386	`...............a...`	2404	94
EU362881.1	Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c	2387	`...c...............`	2405	94
EU362883.1	Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c	2385	`.........t.........`	2403	94
EU362891.1	Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c	2348	`...c...............`	2366	94
EU362898.1	Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete	2330	`.........t.........`	2348	94
EU362899.1	Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds	2387	`...............a...`	2405	94
EU362900.1	Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds	2386	`...............a...`	2404	94
EU362902.1	Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds	2386	`...c...............`	2404	94
EU362903.1	Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds	2385	`.........t.........`	2403	94
EU239716.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet	2343	`...c...............`	2361	94
EU260396.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete	2329	`...c...............`	2347	94
EU234063.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet	2347	`...c...............`	2365	94
EU155232.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V164/2002, complet	2375	`...............a...`	2393	94
EU155237.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet	2367	`...c...............`	2385	94
EU155238.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet	2352	`...............a...`	2370	94
EU482832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete	2336	`...c...............`	2354	94
EU482846.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet	2356	`...c...............`	2374	94
EU482847.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete	2343	`...c...............`	2361	94
EU482850.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet	2321	`...c...............`	2339	94
EU482857.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V263/2005, complet	2343	`...c...............`	2361	94
EU482859.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V272/2003, complet	2374	`...............a...`	2392	94
EU482861.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V446/2006, complet	2352	`...............a...`	2370	94
EU482863.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet	2356	`...c...............`	2374	94
EU482866.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet	2359	`...c...............`	2377	94
EU482870.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete	2367	`...c...............`	2385	94
EU482873.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete	2337	`.........t.........`	2355	94
EU482875.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V310/2005, complet	2374	`...............a...`	2392	94
EU482876.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet	2361	`.........t.........`	2379	94
EU482877.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V342/2001, complet	2380	`...c...............`	2398	94
EU482880.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V373/2006, complet	2377	`...c...............`	2395	94
EU482884.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V38/2004, complete	2116	`...c...............`	2134	94
EU155247.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1/2005, complete	2350	`...............a...`	2368	94
EU155250.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V358/2006, complet	2351	`............t......`	2369	94
EU155251.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V359/2006, complet	2337	`...............a...`	2355	94
EU155273.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V406/2006, complet	2295	`...c...............`	2313	94
EU155276.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V432/2002, complet	2345	`...c...............`	2363	94
EU155284.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V317/2001, complet	2360	`...c...............`	2378	94
EU155285.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V318/2001, complet	2334	`...c...............`	2352	94
EU155287.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V320/2001, complet	2381	`............a......`	2399	94
EU155292.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V327/2001, complet	2353	`...c...............`	2371	94
EU155298.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V334/2002, complet	2356	`...c...............`	2374	94
EU155306.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V352/2002, complet	2374	`...c...............`	2392	94
EU155316.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V419/2002, complet	2374	`...............a...`	2392	94
EU155339.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V172/1990, complet	2321	`...c...............`	2339	94
EU155354.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V269/2005, complet	2351	`...c...............`	2369	94
EU155355.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V270/2006, complet	2350	`...............a...`	2368	94
EU155364.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V288/2006, complet	2374	`...c...............`	2392	94
EU155366.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V294/2002, complet	2374	`...c...............`	2392	94
EU155373.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V307/2005, complet	2374	`...c...............`	2392	94
EU155380.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V35/2004, complete	2331	`............a......`	2349	94
EU529677.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V52/2006, complete	2354	`...c...............`	2372	94
EU529679.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V76/2002, complete	2339	`...c...............`	2357	94
EU529680.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V80/2002, complete	2363	`...............a...`	2381	94
EU529682.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V291/2002, complet	2092	`...............a...`	2110	94
EU687193.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1562/2005, comple	2321	`...c...............`	2339	94
EU255931.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V108/2003, complet	2352	`............a......`	2370	94
EU255932.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V111/2005, complet	2352	`...c...............`	2370	94
EU255934.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V453/2006, complet	2360	`.........t.........`	2378	94
EU255938.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V88/2003, complete	2358	`...c...............`	2376	94
EU255944.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V224/2003, complet	2328	`...c...............`	2346	94
EU255953.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V248/2006, complet	2349	`.g.................`	2367	94
EU255956.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V259/2003, complet	2353	`..c................`	2371	94
EU255960.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V312/2006, complet	2374	`...............a...`	2392	94
EU256060.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V360/2006, complet	2346	`...c...............`	2364	94
EU256061.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V364/2006, complet	2374	`...............a...`	2392	94
EU256067.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V402/2006, complet	2353	`...c...............`	2371	94
EU256068.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V405/2006, complet	2346	`...c...............`	2364	94
EU256090.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V162/2002, complet	2374	`...............a...`	2392	94
EU256098.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V343/2002, complet	2389	`...c...............`	2407	94
EU256102.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V415/2001, complet	2374	`...............a...`	2392	94
EU256104.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V430/2005, complet	2343	`...c...............`	2361	94
EU255997.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V109/2003, complet	2323	`...c...............`	2341	94
EU255998.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V113/2001, complet	2353	`..c................`	2371	94
EU256002.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V41/2006, complete	2367	`...c...............`	2385	94
EU256010.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V50/2002, complete	2321	`...c...............`	2339	94
EU256015.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V57/2004, complete	2344	`...c...............`	2362	94
EU256018.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V60/2002, complete	2341	`...c...............`	2359	94
EU256019.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V61/2001, complete	2348	`...............a...`	2366	94
EU256020.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V62/2003, complete	2359	`...............a...`	2377	94
EU256026.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V82/2002, complete	2357	`...c...............`	2375	94
EU256027.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V83/2003, complete	2365	`...c...............`	2383	94
EU256030.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V87/2002, complete	2335	`...c...............`	2353	94
EU256032.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V92/2003, complete	2350	`...c...............`	2368	94
EU256035.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V96/2004, complete	2352	`.........t.........`	2370	94
EU256047.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V393/2006, complet	2352	`...c...............`	2370	94
EU256048.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V394/2006, complet	2352	`...c...............`	2370	94
EU256051.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V4/2005, complete	2348	`...c...............`	2366	94
EU256053.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V440/2001, complet	2353	`............a......`	2371	94
EU256056.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V7/2003, complete	2323	`...c...............`	2341	94
EU256057.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V702/2006, complet	2360	`...c...............`	2378	94
EU256075.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V279/2004, complet	2374	`...c...............`	2392	94
EU255962.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V140/1991, complet	2092	`...c...............`	2110	94
EU255966.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V170/1997, complet	2357	`...c...............`	2375	94
EU255969.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V174/1992, complet	2348	`...c...............`	2366	94
EU255973.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V180/1990, complet	2347	`...c...............`	2365	94
EU255974.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V181/1992, complet	2350	`...c...............`	2368	94
EU255975.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V183/1994, complet	2351	`...c...............`	2369	94
EU255976.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V184/1992, complet	2347	`...c...............`	2365	94
EU255985.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V201/1991, complet	2355	`...c...............`	2373	94
EU255988.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V206/1995, complet	2342	`...c...............`	2360	94
EU255991.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V210/1989, complet	2341	`.g.................`	2359	94
AM910652.2	Hepatitis C virus subtype 1g complete genome	2410	`...c...............`	2428	94
FJ024276.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1710/2007, comple	2318	`...c...............`	2336	94
FJ024281.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1718/2007, comple	2350	`...c...............`	2368	94
EU862826.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V198/1989, partial	2343	`...c...............`	2361	94
FJ181999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1706/2007, comple	2337	`...............a...`	2355	94
FJ205869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1720/2006, comple	2320	`...............a...`	2338	94
FJ410172.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1746/2008, comple	2320	`...c...............`	2338	94
EU781804.1	Hepatitis C virus subtype 1a isolate 02-46, complete genome	2341	`...c...............`	2359	94
FJ462440.1	Hepatitis C virus isolate QC93, complete genome	2426	`............c......`	2444	94
FN435993.1	Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN	2427	`...............a...`	2445	94
EU862831.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V400/2006, complet	2344	`...c...............`	2362	94
EU862834.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V37/2004, complete	2271	`...c...............`	2289	94
EU862838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V165/1992, complet	2362	`...c...............`	2380	94
EU862839.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V175/1990, complet	2354	`...c...............`	2372	94
AB559564.1	Hepatitis C virus HCV gene for hepatitis C virus polyprotein, complet	2438	`...c...............`	2456	94
HM777359.1	Hepatitis C virus isolate C1292 genotype 2j, complete genome	2357	`...c...............`	2375	94
DQ835763.1	Hepatitis C virus subtype 6m isolate C-0208, complete genome	2431	`__.................`	2447	89
DQ835767.1	Hepatitis C virus subtype 6m isolate B4/92, complete genome	2431	`__.................`	2447	89
EU643834.1	Hepatitis C virus isolate HCV-6-D140 polyprotein gene, complete cds	2167	`__.................`	2183	89
D50409.1	Hepatitis C virus (isolate BEBE1) genomic RNA, complete genome	2437	`...c.............._`	2454	89
AF207773.1	Hepatitis C virus subtype 1b strain MD32, complete genome	2414	`...............a.._`	2431	89
AF207774.1	Hepatitis C virus subtype 1b strain MD33, complete genome	2415	`_..............a...`	2432	89
AF356827.1	Hepatitis C virus subtype 1b isolate HCV-S1, complete genome	2426	`...c.............._`	2443	89
AF511948.1	Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque	2426	`...c.............._`	2443	89
AB080299.1	Hepatitis C virus genomic RNA, complete genome, isolate:M1LE	2426	`...c.............._`	2443	89
AY232740.1	Hepatitis C virus clone MD2b6-1 polyprotein mRNA, complete cds	2401	`...c.............._`	2418	89
AY232746.1	Hepatitis C virus clone MD2b9-1 polyprotein mRNA, complete cds	2401	`...c.............._`	2418	89
AY232747.1	Hepatitis C virus clone MD2b9-2 polyprotein mRNA, complete cds	2401	`...c.............._`	2418	89
AY232748.1	Hepatitis C virus clone MD2b10-1 polyprotein mRNA, complete cds	2401	`...c.............._`	2418	89
AY232749.1	Hepatitis C virus clone MD2b10-2 polyprotein mRNA, complete cds	2401	`...c.............._`	2418	89
EF407417.1	Hepatitis C virus isolate 4040 polyprotein gene, complete cds	2385	`...c.............._`	2402	89
EU362895.1	Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete	2345	`_..c...............`	2362	89
EU155214.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V104/2005, complet	2353	`_..c...............`	2370	89
EU155243.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete	2321	`...c.............._`	2338	89
EU482843.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet	2353	`...............a.._`	2370	89
EU482860.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V302/2003, complet	2374	`...............a.._`	2391	89
EU482867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V461/2006, complet	2359	`...............a.._`	2376	89
EU482874.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V287/2005, complet	2377	`...............a.._`	2394	89
EU155272.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V404/2006, complet	2323	`_..c...............`	2340	89
EU155320.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V425/2001, complet	2297	`...c.............._`	2314	89
EU155326.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V124/1992, complet	2374	`...c.............._`	2391	89
EU155353.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V267/2005, complet	2344	`...............a.._`	2361	89
EU155362.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V282/2004, complet	2374	`...c.............._`	2391	89
EU155365.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V289/2006, complet	2374	`...............a.._`	2391	89
EU155375.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V309/2006, complet	2374	`...c.............._`	2391	89
EU529676.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V39/2004, complete	2359	`_..c...............`	2376	89
EU255933.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V112/2003, complet	2335	`_..c...............`	2352	89
EU255935.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V462/2007, complet	2356	`...c.............._`	2373	89
EU256062.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V368/2006, complet	2377	`...............a.._`	2394	89
EU255993.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V102/2004, complet	2353	`_..c...............`	2370	89
EU256043.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V3/2005, complete	2321	`...c.............._`	2338	89
EU256076.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V280/2004, complet	2374	`...............a.._`	2391	89
EU862823.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V24/2003, complete	2331	`...c.............._`	2348	89
FJ390394.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1745/2008, comple	2336	`...c.............._`	2353	89
AB442222.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	2429	`...c.............._`	2446	89
GQ149768.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2147/2002, comple	2337	`...c.............._`	2354	89
X61596.1	Hepatitis C virus core, E1, NS1/E2, NS2, NS3, NS4a, NS4b and NS5 gene	2409	`...c...........a...`	2427	89
D13558.1	HPCJ483 Hepatitis C virus genome, complete sequence	2426	`...c...........a...`	2444	89
D10750.1	HPCJ491 Hepatitis C virus genome, complete sequence	2426	`...c...........a...`	2444	89
D90208.1	HPCJCG Hepatitis C virus ORF gene, complete cds	2414	`...c...........a...`	2432	89
L02836.1	HPCCGENOM Hepatitis C virus subtype 1b strain HeBei, complete genome	2415	`...c...........a...`	2433	89
M58335.1	HPCHUMR Hepatitis C virus subtype 1b, complete genome	2417	`...c...........a...`	2435	89
S62220.1	Hepatitis C virus subtype 1b, complete genome	2425	`...c...........a...`	2443	89
U01214.1	HCU01214 Hepatitis C virus subtype 1b strain HCV-L2, complete genome	2427	`...c...........a...`	2445	89
D10934.1	HPCRNA Hepatitis C virus RNA, complete genome sequence	2426	`...c...........a...`	2444	89
D49374.1	HPCFG Hepatitis C virus (isolate Tr Kj) genomic RNA, complete genome	2448	`...c...........a...`	2466	89
D63857.1	HPVHCVN Hepatitis C virus gene for E1 and E2/NS1 envelope glycoprotein	2333	`...c...........a...`	2351	89
D50482.1	HPCK1R3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R3), complete g	2414	`...c...........a...`	2432	89
D50483.1	HPCK1S1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S1), complete g	2414	`...c...........a...`	2432	89
D50484.1	HPCK1S3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S3), complete g	2414	`...c...........a...`	2432	89
D50485.1	HPCK1S2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S2), complete g	2414	`...c...........a...`	2432	89
D50481.1	HPCK1R2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R2), complete g	2414	`...c...........a...`	2432	89
D50480.1	HPCK1R1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R1), complete g	2414	`...c...........a...`	2432	89
D14484.1	HPCJRNA Hepatitis C virus strain J33 genomic RNA, complete genome	2426	`...c...........a...`	2444	89
AJ000009.1	Hepatitis C virus complete genome sequence	2409	`...c...........a...`	2427	89
AF054247.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete	2426	`...c...........a...`	2444	89
AF054248.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete	2426	`...c...........a...`	2444	89
AF054249.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete	2427	`...c...........a...`	2445	89
AF054250.1	Hepatitis C virus subtype 1b strain HC-J4, complete genome	2416	`...c...........a...`	2434	89
AJ132996.1	Hepatitis C virus, complete genome, isolate HCV-AD78	2431	`...c...........a...`	2449	89
AB016785.1	Hepatitis C virus genomic RNA, complete sequence	2430	`...c...........a...`	2448	89
AF165045.1	Hepatitis C virus subtype 1b strain MD1-1, complete genome	2414	`...c...........a...`	2432	89
AF165046.1	Hepatitis C virus subtype 1b strain MD1-2, complete genome	2414	`...c...........a...`	2432	89
AF165049.1	Hepatitis C virus subtype 1b strain MD3-1, complete genome	2414	`...c...........a...`	2432	89
AF165050.1	Hepatitis C virus subtype 1b strain MD3-2, complete genome	2414	`...c...........a...`	2432	89
AF165051.1	Hepatitis C virus subtype 1b strain MD4-1, complete genome	2414	`...c...........a...`	2432	89
AF165052.1	Hepatitis C virus subtype 1b strain MD4-2, complete genome	2414	`...c...........a...`	2432	89
AF165053.1	Hepatitis C virus subtype 1b strain MD5-1, complete genome	2414	`...c...........a...`	2432	89
AF165054.1	Hepatitis C virus subtype 1b strain MD5-2, complete genome	2414	`...c...........a...`	2432	89
AF165057.1	Hepatitis C virus subtype 1b strain MD7-1, complete genome	2414	`...c...........a...`	2432	89
AF165058.1	Hepatitis C virus subtype 1b strain MD7-2, complete genome	2414	`...c...........a...`	2432	89
AF165063.1	Hepatitis C virus subtype 1b strain MD10-1, complete genome	2414	`...c...........a...`	2432	89
AF165064.1	Hepatitis C virus subtype 1b strain MD10-2, complete genome	2414	`...c...........a...`	2432	89
AF169003.1	Hepatitis C virus subtype 2a isolate G2aK1, complete genome	2434	`............a..a...`	2452	89
AF238483.1	Hepatitis C virus subtype 2a strain MD2a-4, complete genome	2403	`...c...........a...`	2421	89
AF207755.1	Hepatitis C virus subtype 1b strain MD14, complete genome	2414	`...c...........a...`	2432	89
AF207757.1	Hepatitis C virus subtype 1b strain MD16, complete genome	2414	`...c...........a...`	2432	89
AF207758.1	Hepatitis C virus subtype 1b strain MD17, complete genome	2414	`...c...........a...`	2432	89
AF207759.1	Hepatitis C virus subtype 1b strain MD18, complete genome	2414	`...c...........a...`	2432	89
AF207760.1	Hepatitis C virus subtype 1b strain MD19, complete genome	2414	`...c...........a...`	2432	89
AF207761.1	Hepatitis C virus subtype 1b strain MD20, complete genome	2414	`...c...........a...`	2432	89
AF207763.1	Hepatitis C virus subtype 1b strain MD22, complete genome	2414	`...c...........a...`	2432	89
AF207768.1	Hepatitis C virus subtype 1b strain MD27, complete genome	2414	`...c...........a...`	2432	89
AF207769.1	Hepatitis C virus subtype 1b strain MD28, complete genome	2414	`...c...........a...`	2432	89
AF207771.1	Hepatitis C virus subtype 1b strain MD30, complete genome	2414	`...c...........a...`	2432	89
AF207772.1	Hepatitis C virus subtype 1b strain MD31, complete genome	2414	`...c...........a...`	2432	89
AB049087.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT05	2395	`...c...........a...`	2413	89
AB049089.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT10	2395	`...c...........a...`	2413	89
AB049092.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	2395	`...c...........a...`	2413	89
AB049096.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	2395	`...c...........a...`	2413	89
AB049098.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT20	2395	`...c...........a...`	2413	89
AB049099.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	2429	`...c...........a...`	2447	89
AY045702.1	Hepatitis C virus isolate HCR6, complete genome	2428	`...c...........a...`	2446	89
AF139594.2	Hepatitis C virus subtype 1b strain HCV-N, complete genome	2429	`...c...........a...`	2447	89
AY460204.1	Hepatitis C virus from Shanghai, complete genome	2426	`............a..a...`	2444	89
AY587844.1	Hepatitis C virus strain N589 polyprotein gene, complete cds	2374	`...c...........a...`	2392	89
AB154179.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154180.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154183.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154185.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154186.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154189.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154191.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154192.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154198.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154199.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154203.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154204.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154205.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB154206.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`...c...........a...`	2432	89
AB191333.1	Hepatitis C virus genomic RNA, complete genome, strain:0	2426	`...c...........a...`	2444	89
DQ071885.1	Hepatitis C virus subtype 1b polyprotein mRNA, complete cds	2426	`...c...........a...`	2444	89
AJ851228.1	Hepatitis C virus gene for polyprotein, genomic RNA, isolate Equatori	2402	`...c...........a...`	2420	89
DQ480524.1	Hepatitis C virus subtype 6a strain 6a74, complete genome	2401	`...a.............t.`	2419	89
DQ835769.1	Hepatitis C virus subtype 6j isolate Th553, complete genome	2429	`...c...........a...`	2447	89
DQ835769.1	Hepatitis C virus subtype 6j isolate Th553, complete genome	5885	`............t._____`	5898	68
EF621489.1	Hepatitis C virus subtype 1a strain HC-TN, complete genome	2426	`...c...........a...`	2444	89
EF407413.1	Hepatitis C virus isolate 5012 polyprotein gene, complete cds	2373	`...c...........a...`	2391	89
EF407426.1	Hepatitis C virus isolate 8070 polyprotein genomic sequence	2375	`.........t..a......`	2393	89
EF407427.1	Hepatitis C virus isolate 6025 polyprotein gene, complete cds	2373	`...c...........a...`	2391	89
EF407431.1	Hepatitis C virus isolate 3005 polyprotein gene, complete cds	2324	`...c...........a...`	2342	89
EF407435.1	Hepatitis C virus isolate 5014 polyprotein gene, complete cds	2343	`...c...........a...`	2361	89
EF407444.1	Hepatitis C virus isolate 6030 polyprotein gene, complete cds	2347	`.g.c...............`	2365	89
EF407461.1	Hepatitis C virus isolate 5004 polyprotein gene, complete cds	2406	`...c...........a...`	2424	89
EF407465.1	Hepatitis C virus isolate 6017 polyprotein gene, complete cds	2371	`...c...........a...`	2389	89
EF407470.1	Hepatitis C virus isolate 4064 polyprotein gene, complete cds	2378	`...c...........a...`	2396	89
EF407471.1	Hepatitis C virus isolate 5044 polyprotein gene, complete cds	2371	`...c...........a...`	2389	89
EF407472.1	Hepatitis C virus isolate 4034 polyprotein gene, complete cds	2372	`...c...........a...`	2390	89
EF407475.1	Hepatitis C virus isolate 3009 polyprotein gene, complete cds	2358	`...c...........a...`	2376	89
EF407476.1	Hepatitis C virus isolate 3012 polyprotein gene, complete cds	2361	`...c...........a...`	2379	89
EF407480.1	Hepatitis C virus isolate 3043 polyprotein gene, complete cds	2373	`...c...........a...`	2391	89
EF407482.1	Hepatitis C virus isolate 6053 polyprotein gene, complete cds	2311	`...c...........a...`	2329	89
EF407483.1	Hepatitis C virus isolate 4043 polyprotein gene, complete cds	2401	`...c...........a...`	2419	89
EF407485.1	Hepatitis C virus isolate 7026 polyprotein gene, complete cds	2381	`...c...........a...`	2399	89
EF407492.1	Hepatitis C virus isolate 7025 polyprotein gene, complete cds	2366	`...c...........a...`	2384	89
EF407493.1	Hepatitis C virus isolate 3031 polyprotein gene, complete cds	2381	`...c...........a...`	2399	89
EF407501.1	Hepatitis C virus isolate 7055 polyprotein gene, complete cds	2399	`...c...........a...`	2417	89
EU155294.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet	2320	`...c...........a...`	2338	89
EU155379.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete	2322	`...c...........a...`	2340	89
EU260395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete	2359	`...c...........a...`	2377	89
EU362882.1	Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete	2345	`...c...........a...`	2363	89
EU362886.1	Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete	2348	`...c...........a...`	2366	89
EU239713.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet	2374	`...c...........a...`	2392	89
EU239714.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V417/2001, complet	2375	`...c...........a...`	2393	89
EU250017.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet	2343	`...c.....t.........`	2361	89
EU234061.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V126/1991, complet	2374	`...c...........a...`	2392	89
EU155213.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet	2355	`...c...........a...`	2373	89
EU155217.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V142/2004, complet	2374	`...c...........a...`	2392	89
EU155219.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V146/2002, complet	2374	`...c...........a...`	2392	89
EU155220.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V147/2004, complet	2360	`...c...........a...`	2378	89
EU155221.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V148/2004, complet	2374	`...c...........a...`	2392	89
EU155230.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V160/2002, complet	2374	`...c...........a...`	2392	89
EU155234.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V447/2006, complet	2375	`...c...........a...`	2393	89
EU155235.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V449/2006, complet	2374	`...c...........a...`	2392	89
EU482833.1	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V503/2003, complet	2374	`...c...........a...`	2392	89
EU482835.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet	2359	`...c...........a...`	2377	89
EU482839.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V370/2006, complet	2374	`...c...........a...`	2392	89
EU482840.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V386/2004, complet	2364	`...c...........a...`	2382	89
EU482844.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet	2360	`...c...........a...`	2378	89
EU482854.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet	2343	`...c...........a...`	2361	89
EU482855.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet	2337	`...c...........a...`	2355	89
EU482868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete	2343	`...c.....t.........`	2361	89
EU482881.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V383/2003, complet	2383	`...c...........a...`	2401	89
EU482883.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V153/2005, complet	2380	`...c...........a...`	2398	89
EU482886.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V458/2006, complet	2378	`...c...........a...`	2396	89
EU482888.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V123/1992, complet	2377	`...c...........a...`	2395	89
EU482889.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V179/1990, complet	2359	`...c...........a...`	2377	89
EU155255.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V366/2006, complet	2380	`...c...........a...`	2398	89
EU155256.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V367/2006, complet	2374	`...c...........a...`	2392	89
EU155258.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V371/2006, complet	2374	`...c...........a...`	2392	89
EU155259.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V374/2006, complet	2374	`...c...........a...`	2392	89
EU155261.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V379/2005, complet	2375	`...c...........a...`	2393	89
EU155262.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V381/2001, complet	2374	`...c...........a...`	2392	89
EU155264.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V385/2006, complet	2352	`...c...........a...`	2370	89
EU155265.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V388/2005, complet	2346	`...c...........a...`	2364	89
EU155268.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V396/2006, complet	2321	`...c...........a...`	2339	89
EU155269.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V398/2006, complet	2345	`...c...........a...`	2363	89
EU155279.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V441/2001, complet	2374	`...c...........a...`	2392	89
EU155280.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V442/2001, complet	2374	`...c...........a...`	2392	89
EU155281.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V512/2005, complet	2374	`...c...........a...`	2392	89
EU155282.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V696/2006, complet	2343	`...c.....t.........`	2361	89
EU155283.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V698/2006, complet	2359	`...c...........a...`	2377	89
EU155289.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V323/2001, complet	2352	`...c...........a...`	2370	89
EU155301.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V344/2001, complet	2374	`...c...........a...`	2392	89
EU155302.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V345/2001, complet	2374	`...c...........a...`	2392	89
EU155304.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V347/2003, complet	2103	`...c...........a...`	2121	89
EU155305.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V350/2002, complet	2374	`...c...........a...`	2392	89
EU155307.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V353/2002, complet	2375	`...c...........a...`	2393	89
EU155308.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V354/2003, complet	2374	`..cc...............`	2392	89
EU155317.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V420/2002, complet	2374	`..c............a...`	2392	89
EU155318.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V421/2005, complet	2374	`...c...........a...`	2392	89
EU155319.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V424/2002, complet	2304	`...c...........a...`	2322	89
EU155325.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V122/1991, complet	2374	`...c...........a...`	2392	89
EU155327.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V125/1992, complet	2364	`...c...........a...`	2382	89
EU155330.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V130/1994, complet	2396	`...c...........a...`	2414	89
EU155331.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V131/1990, complet	2374	`...c...........a...`	2392	89
EU155332.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V132/1996, complet	2374	`...c...........a...`	2392	89
EU155333.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V133/1989, complet	2363	`...c...........a...`	2381	89
EU155334.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V134/1990, complet	2374	`...c...........a...`	2392	89
EU155336.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V139/1992, complet	2374	`...c...........a...`	2392	89
EU155337.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V141/1990, complet	2374	`...c...........a...`	2392	89
EU155351.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V257/2003, complet	2347	`...c...........a...`	2365	89
EU155357.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V275/2003, complet	2374	`...c...........a...`	2392	89
EU155359.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V277/2002, complet	2375	`...c...........a...`	2393	89
EU155360.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V278/2003, complet	2374	`...c...........a...`	2392	89
EU155367.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V295/2002, complet	2374	`.g.............a...`	2392	89
EU155368.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V296/2001, complet	2374	`..cc...............`	2392	89
EU155369.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V297/2002, complet	2374	`............t..a...`	2392	89
EU155370.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V300/2005, complet	2374	`...c...........a...`	2392	89
EU155371.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V301/2005, complet	2371	`...c...........a...`	2389	89
EU155376.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V311/2006, complet	2374	`...c...........a...`	2392	89
EU155377.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V313/2006, complet	2374	`...c...........a...`	2392	89
EU529678.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V63/2005, complete	2340	`...c...........a...`	2358	89
EU595697.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V507/2001, complet	2342	`...c...........a...`	2360	89
EU660383.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V100/2004, complet	2352	`...c...........a...`	2370	89
EU660386.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V355/2006, complet	2374	`...c...........a...`	2392	89
EU660387.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V701/2003, complet	2343	`...c...........a...`	2361	89
EU660388.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V154/2001, complet	2375	`...c...........a...`	2393	89
AB429050.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: AH1	2426	`...c...........a...`	2444	89
EU255939.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V408/2006, complet	2345	`...c...........a...`	2363	89
EU255945.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V225/2004, complet	2345	`...c...........a...`	2363	89
EU256059.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V220/2005, complet	2374	`...c...........a...`	2392	89
EU256064.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V376/2006, complet	2374	`...c...........a...`	2392	89
EU256065.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V377/2006, complet	2374	`..c............a...`	2392	89
EU256066.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V382/2003, complet	2375	`...c...........a...`	2393	89
EU256088.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V149/2003, complet	2374	`...c...........a...`	2392	89
EU256091.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V455/2006, complet	2092	`...c...........a...`	2110	89
EU256099.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V348/2002, complet	2374	`...c...........a...`	2392	89
EU155347.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V239/2005, complet	2337	`...c...........a...`	2355	89
EU255996.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V107/2003, complet	2357	`...c...........a...`	2375	89
EU255999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V116/2002, complet	2339	`...c...........a...`	2357	89
EU256000.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V143/2003, complet	2374	`...c...........a...`	2392	89
EU256001.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V144/2002, complet	2374	`...c...........a...`	2392	89
EU256004.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V45/2005, complete	2333	`...c...........a...`	2351	89
EU256014.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V56/2004, complete	2321	`............a..a...`	2339	89
EU256021.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V64/2003, complete	2344	`...c...........a...`	2362	89
EU256022.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V65/2003, complete	2343	`...c...........a...`	2361	89
EU256034.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V95/2006, complete	2356	`.........t.....a...`	2374	89
EU256045.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V380/2003, complet	2374	`...c...........a...`	2392	89
EU256049.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V395/2006, complet	2352	`...c...........a...`	2370	89
EU256054.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V443/2001, complet	2374	`...c...........a...`	2392	89
EU256080.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V292/2002, complet	2374	`...c...........a...`	2392	89
EU255970.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V176/1992, complet	2344	`...c...........a...`	2362	89
EU255982.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V194/1990, complet	2350	`...c...........a...`	2368	89
EU255987.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V205/1989, complet	2334	`...c...........a...`	2352	89
EU255989.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V208/1990, complet	2359	`...c...........a...`	2377	89
EU255992.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V213/1992, complet	2347	`...c.....t.........`	2365	89
FJ024279.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1715/2007, comple	2374	`...c...........a...`	2392	89
EU862835.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V509/2001, partial	2373	`...c...........a...`	2391	89
FJ390396.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1748/2007, comple	2374	`...c...........a...`	2392	89
FJ390397.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1749/2008, comple	2374	`...c...........a...`	2392	89
FJ390399.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1751/2007, comple	2297	`.........t..a......`	2315	89
FJ478453.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V2148/1999, comple	2374	`...c...........a...`	2392	89
AB442219.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	2426	`...c...........a...`	2444	89
AB442221.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH	2426	`...c...........a...`	2444	89
AB520610.1	Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC	2426	`...c...........a...`	2444	89
GU133617.1	Hepatitis C virus subtype 1b, complete genome	2426	`...c...........a...`	2444	89
DQ278892.1	Hepatitis C virus isolate GZ52557, complete genome	2441	`__.............a...`	2457	84
DQ835765.1	Hepatitis C virus subtype 6m isolate C-0185, complete genome	2431	`__....a............`	2447	84
DQ835766.1	Hepatitis C virus subtype 6m isolate C-0192, complete genome	2431	`__....a............`	2447	84
EU155229.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V159/2004, complet	2375	`_..c.............._`	2391	84
EU660385.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V258/2003, complet	2336	`_..c.............._`	2352	84
EU687194.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1563/2004, comple	2354	`_..c.............._`	2370	84
EU256083.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V299/2005, complet	2376	`__.c...............`	2392	84
D30613.1	HPCPP Hepatitis C virus complete genome sequence	2426	`...c...........a.._`	2443	84
D45172.1	HPCHCPO Hepatitis C virus genomic RNA for HCV polyprotein, complete cd	2426	`...c...........a.._`	2443	84
D89872.1	Hepatitis C virus RNA for polyprotein, complete cds	2086	`_..c...........a...`	2103	84
D85516.1	Hepatitis C virus genomic RNA, complete cds	2426	`...c...........a.._`	2443	84
AF165047.1	Hepatitis C virus subtype 1b strain MD2-1, complete genome	2414	`...c...........a.._`	2431	84
AF165048.1	Hepatitis C virus subtype 1b strain MD2-2, complete genome	2414	`...c...........a.._`	2431	84
AF165059.1	Hepatitis C virus subtype 1b strain MD8-1, complete genome	2414	`...c...........a.._`	2431	84
AF207752.1	Hepatitis C virus subtype 1b strain MD11, complete genome	2414	`...c...........a.._`	2431	84
AF207756.1	Hepatitis C virus subtype 1b strain MD15, complete genome	2414	`...c...........a.._`	2431	84
AF207767.1	Hepatitis C virus subtype 1b strain MD26, complete genome	2414	`...c...........a.._`	2431	84
AJ278830.1	Hepatitis C virus genomic RNA for polyprotein gene	2426	`...c...........a.._`	2443	84
AB049097.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	2396	`_..c...........a...`	2413	84
AB049100.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	2395	`...c...........a.._`	2412	84
AF333324.1	Hepatitis C virus type 1b polyprotein mRNA, complete cds	2427	`_..c...........a...`	2444	84
AB047645.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-6	2435	`_..c...........a...`	2452	84
AB154177.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2415	`_..c...........a...`	2432	84
AB154178.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2415	`_..c...........a...`	2432	84
AB154190.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2415	`_..c...........a...`	2432	84
D84265.2	Hepatitis C virus (isolate VN004) genomic RNA, complete genome	2426	`..........a.a....._`	2443	84
AY878650.1	Hepatitis C virus subtype 6k isolate KM45, complete genome	2412	`.g....a..........._`	2429	84
AY878651.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	2397	`.g..........a....._`	2414	84
DQ278891.1	Hepatitis C virus subtype 6k isolate KM45, complete genome	2428	`.g....a..........._`	2445	84
DQ278893.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	2429	`.g..........a....._`	2446	84
DQ835762.1	Hepatitis C virus subtype 6i isolate C-0159, complete genome	2430	`_..c...........a...`	2447	84
DQ835770.1	Hepatitis C virus subtype 6i isolate Th602, complete genome	2430	`_..c...........a...`	2447	84
DQ835770.1	Hepatitis C virus subtype 6i isolate Th602, complete genome	5885	`............t._____`	5898	68
EF407415.1	Hepatitis C virus isolate 3018 polyprotein gene, complete cds	2376	`...c...........a.._`	2393	84
EF407439.1	Hepatitis C virus isolate 8003 polyprotein gene, complete cds	2371	`...c...........a.._`	2388	84
EF407447.1	Hepatitis C virus isolate 8004 polyprotein gene, complete cds	2386	`.g.c.............._`	2403	84
EF407469.1	Hepatitis C virus isolate 4014 polyprotein gene, complete cds	2371	`_..c...........a...`	2388	84
EF407488.1	Hepatitis C virus isolate 8016 polyprotein gene, complete cds	2371	`_..c...........a...`	2388	84
EF407502.1	Hepatitis C virus isolate 2038 polyprotein gene, complete cds	2455	`...c...........a.._`	2472	84
EF407504.1	Hepatitis C virus isolate 8069 polyprotein gene, complete cds	2380	`...c...........a.._`	2397	84
EU155345.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet	2334	`...c...........a.._`	2351	84
EU234064.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet	2340	`...c...........a.._`	2357	84
EU155215.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet	2321	`..c...a..........._`	2338	84
EU155222.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V150/2004, complet	2374	`...c...........a.._`	2391	84
EU155228.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V158/2003, complet	2374	`...c...........a.._`	2391	84
EU155233.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet	2353	`...c...........a.._`	2370	84
EU155242.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V73/2004, complete	2343	`...c...........a.._`	2360	84
EU482831.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete	2332	`...c...........a.._`	2349	84
EU482834.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet	2308	`...c...........a.._`	2325	84
EU482853.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet	2346	`_..c...........a...`	2363	84
EU482858.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet	2350	`...c...........a.._`	2367	84
EU482869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V70/2002, complete	2343	`...c...........a.._`	2360	84
EU482871.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete	2335	`...c...........a.._`	2352	84
EU482879.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V372/2006, complet	2377	`...c...........a.._`	2394	84
EU482885.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V448/2006, complet	2377	`...c...........a.._`	2394	84
EU155324.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V121/1992, complet	2375	`_..c.....t.........`	2392	84
EU155335.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V136/1992, complet	2374	`...c...........a.._`	2391	84
EU155346.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V236/2005, complet	2348	`...c...........a.._`	2365	84
EU155348.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V240/2005, complet	2335	`...c...........a.._`	2352	84
EU155349.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V246/2005, complet	2333	`...c...........a.._`	2350	84
EU155381.2	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V502/2004, complet	2374	`...c...........a.._`	2391	84
EU529681.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V251/2005, complet	2342	`...c...........a.._`	2359	84
EU660384.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V55/2005, complete	2374	`...c...........a.._`	2391	84
EU255927.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V222/2003, complet	2347	`...c...........a.._`	2364	84
EU255928.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V231/2003, complet	2352	`...c...........a.._`	2369	84
EU255929.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V233/2004, complet	2352	`...c...........a.._`	2369	84
EU255930.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V237/2005, complet	2352	`...c...........a.._`	2369	84
EU255946.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V226/2005, complet	2353	`...c...........a.._`	2370	84
EU255947.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V228/2006, complet	2359	`...c...........a.._`	2376	84
EU255948.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V230/2003, complet	2354	`...c...........a.._`	2371	84
EU255949.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V235/2005, complet	2352	`...c...........a.._`	2369	84
EU255950.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V241/2005, complet	2344	`...c...........a.._`	2361	84
EU255951.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V245/2005, complet	2358	`...c...........a.._`	2375	84
EU255954.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V252/2002, complet	2351	`...c...........a.._`	2368	84
EU255955.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V254/2002, complet	2335	`...c...........a.._`	2352	84
EU255957.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V260/2004, complet	2374	`...c...........a.._`	2391	84
EU255958.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V265/2005, complet	2352	`...c...........a.._`	2369	84
EU255959.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V268/2003, complet	2319	`...c...........a.._`	2336	84
EU256092.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V463/2006, complet	2375	`_..c...........a...`	2392	84
EU256103.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V418/2001, complet	2372	`_..c...........a...`	2389	84
EU256107.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V36/2004, complete	2353	`...c...........a.._`	2370	84
EU255995.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V106/2004, complet	2351	`...c...........a.._`	2368	84
EU256023.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V67/2003, complete	2352	`...c...........a.._`	2369	84
EU256029.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V85/2001, complete	2339	`...c...........a.._`	2356	84
EU256046.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V392/2006, complet	2353	`_..c...........a...`	2370	84
EU256069.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V229/2006, complet	2333	`...c...........a.._`	2350	84
EU256071.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V234/2004, complet	2321	`...c...........a.._`	2338	84
EU256072.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V238/2005, complet	2333	`...c...........a.._`	2350	84
EU256078.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V284/2005, complet	2376	`...c...........a.._`	2393	84
EU857431.1	Hepatitis C virus subtype 1b isolate Whu, complete genome	2426	`...c...........a.._`	2443	84
FJ024282.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1719/2005, comple	2338	`...c...........a.._`	2355	84
EU862836.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V244/2003, complet	2352	`...c...........a.._`	2369	84
EU862840.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V40/2003, complete	2367	`...c...........a.._`	2384	84
EU862841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V48/2003, complete	2341	`...c...........a.._`	2358	84
D00944.1	HPCPOLP Hepatitis C virus genomic RNA for polyprotein, complete cds	2437	`...c...........a.t.`	2455	84
U45476.1	HCU45476 Hepatitis C virus isolate HD-1, complete genome	2426	`.g.c...........a...`	2444	84
AJ132997.1	Hepatitis C virus, complete genome, isolate HCV-AD78P1	2425	`..cc...........a...`	2443	84
AF207753.1	Hepatitis C virus subtype 1b strain MD12, complete genome	2414	`.g.c...........a...`	2432	84
AF207766.1	Hepatitis C virus subtype 1b strain MD25, complete genome	2414	`.g.c...........a...`	2432	84
AB154181.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`..cc...........a...`	2432	84
AB154182.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`..cc...........a...`	2432	84
AB154187.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`..cc...........a...`	2432	84
AB154194.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`..cc...........a...`	2432	84
AB154200.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	2414	`..cc...........a...`	2432	84
DQ437509.2	Hepatitis C virus isolate 452 polyprotein gene, partial cds	2103	`.........t..c..a...`	2121	84
EF026073.1	Hepatitis C virus strain RF3 2/5 polyprotein mRNA, partial cds	2415	`.........t..c..a...`	2433	84
AM408911.1	Hepatitis C virus partial gene for polyprotein, recombinant 2/5, geno	2415	`.........t..c..a...`	2433	84
EF407497.1	Hepatitis C virus isolate 5002 polyprotein gene, complete cds	2370	`..cc...........a...`	2388	84
EU155226.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V156/2004, complet	2374	`..........a.a..a...`	2392	84
EU155329.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V128/1992, complet	2374	`..cc...........a...`	2392	84
EU255952.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V247/2005, complet	2347	`.g..........a..a...`	2365	84
EU256101.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V351/2002, complet	2374	`..cc...........a...`	2392	84
EU256082.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V298/2005, complet	2375	`..cc...........a...`	2393	84
EU256084.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V303/2003, complet	2380	`..........a.a..a...`	2398	84
FJ462438.1	Hepatitis C virus isolate QC383, complete genome	2426	`.........t..c..a...`	2444	84
FN666428.2	Hepatitis C virus gene for polyprotein, genomic RNA, subtype 2q, isol	2410	`..cc.....t.........`	2428	84
M84754.1	HPCGENANTI Hepatitis C virus subtype 1b strain Taiwan, complete genome	2428	`__.c...........a...`	2444	78
AF165060.1	Hepatitis C virus subtype 1b strain MD8-2, complete genome	2415	`_..c...........a.._`	2431	78
AB049091.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	2346	`__.c...........a...`	2362	78
EF407434.1	Hepatitis C virus isolate 2011 polyprotein gene, complete cds	2349	`_..c...........a.._`	2365	78
EU155350.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet	2308	`_..c...........a.._`	2324	78
EU362901.1	Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds	2349	`_..c...........a.._`	2365	78
EU482872.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet	2359	`_..c...........a.._`	2375	78
EU155277.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V434/2003, complet	2322	`_..c...........a.._`	2338	78
EU155352.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V262/2004, complet	2353	`_..c...........a.._`	2369	78
EU687195.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1564/2007, comple	2361	`_..c...........a.._`	2377	78
EU255943.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V223/2003, complet	2346	`_..c...........a.._`	2362	78
EU256025.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V79/2002, complete	2324	`__.g...........a...`	2340	78
EU234062.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V135/1992, complet	2378	`____...........a...`	2392	73
EU482849.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V138/1989, complet	2378	`____...........a...`	2392	73
EU155356.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V273/2003, complet	2374	`..cc...........a.._`	2391	78
EU256079.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V286/2005, complet	2375	`..cc...........a.._`	2392	78
EU246935.1	Hepatitis C virus strain TH24 polyprotein gene, complete cds	5826	`............t._____`	5839	68

VIRsiRNAdb

Database of Viral siRNA / shRNA